The files listed below are formatted for visualization in the Integrated Genome Browser, available from BioViz.org.
Annotation and sequence data are from the papers - The complete mitochondrial genome of yarrowia lipolygica. Genome evolution in yeasts.
Original sequence and annotation files can be found at - http://www.ncbi.nlm.nih.gov/assembly/GCF_000002525.2/ ftp://ftp.ncbi.nlm.nih.gov/genomes/Fungi/Yarrowia_lipolytica_CLIB122_uid12414/
Files with extension .gz were compressed and indexed using bgzip and tabix tools from Heng Li.
To convert a .2bit to fasta, use twoBitToFa. twoBitToFa is available from http://hgdownload.cse.ucsc.edu/admin/exe/.
Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
annots.xml | 2019-09-11 14:04 | 299 | Annotation and data file list | |
Y_lipolytica_CLIB122_feature_annotation.gff.gz.tbi | 2019-09-11 14:04 | 13K | Tabix index file | |
Y_lipolytica_CLIB122_Jul_2004.2bit | 2019-09-11 14:04 | 4.9M | Sequence data in blat 2bit format | |
genome.txt | 2019-09-11 14:04 | 89 | Chromosome lengths and assembly information | |
![]() | Y_lipolytica_CLIB122_feature_annotation.gff.gz | 2019-09-11 14:04 | 1.0M |