Ficedula albicollis (Jun 2013) collared flycatcher FicAlb1.5 genome assembly (GCF_000247815.1)
The files listed below are formatted for visualization in the Integrated Genome Browser, available from BioViz.org.
Annotation (bed) files were downloaded from the NCBI ftp site. See the annots.xml meta-data file in this directory for details.
Files with extension .gz were compressed and indexed using bgzip and tabix tools from htslib.org.
The file named F_albicollis_Jun_2013.2bit contains sequence data and was converted from a fasta file from the NCBI Web site (GCF_000247815.1_FicAlb1.5_genomic.fna.gz). The file genome.txt lists sequences and their sizes and was made from F_albicollis_Jun_2013.2bit sequence file using twoBitInfo.
Both twoBitInfo and twoBitToFa are available from http://hgdownload.cse.ucsc.edu/admin/exe/.
![[ICO]](/quickload/styling/icons/blank.svg){kind=icon} | Name | Last modified | Size | Description |
|---|---|---|---|---|
![[PARENTDIR]](/quickload/styling/icons/glyphicon-circle-arrow-up.svg){kind=icon} | Parent Directory | - | ||
![[ ]](/quickload/styling/icons/glyphicon-file.svg){kind=icon} | F_albicollis_Jun_2013.2bit | 2021-03-31 17:30 | 318M | Sequence data in blat 2bit format |
![[ ]](/icons/compressed.gif){kind=icon} | F_albicollis_Apr_2016.bed.gz | 2021-03-31 17:30 | 1.8M | Annotation or junction file |
| genome.txt | 2021-03-31 17:30 | 423K | Chromosome lengths and assembly information |
| F_albicollis_Apr_2016.bed.gz.tbi | 2021-03-31 17:30 | 57K | Tabix index file |
| annots.xml | 2021-03-31 17:30 | 361 | Annotation and data file list |